Diffusion

2007

Hua K, Zhang J, Wakana S, Jiang H, Li X, Reich DS, Calabresi PA, Pekar JJ, van Zijl PC, Mori S. "Tract probability maps in stereotaxic spaces: Analyses of white matter anatomy and tract-specific quantification." Neuroimage 2007: In press.

Salhotra A, Ll B, Laterra J, Sun PZ, van Zijl PC, Zhou J. "Amide proton transfer Imaging of 9L gliosarcoma and human glioblastoma xenografts." NMR Biomed 2007; in press.

Hua J, Jones CK, Blakeley J, smith SA, van Zijl PC, Zhou J. "Quantitative description of assymetery in magnetization transfer effects around the water resonance in the human brain." Magn. Reson. Med. 2007 Oct; 58(4):786-93.

Reich DS, Smith SA, Zachowski KM, Gordon-Lipkin EM, Jones CK, Farrell JA, Mori S, vanzijl PC, Calabresi PA. "Multiparameteric magnetic resonance imaging analysis of the corticospinal tract in multiple sclerosis." Neuroimage 2007 Nov;38(2):271-9.

Zhang J, Evans A, Hermoya L, Lee SK, Wakana S, Zhang W, Donahue P, Miller MI, Huang H, Wang X, van Zijl PC, Mori S. "Evidence of slow maturation of the superior longitudinal fasciculus in the early childhood by diffusion tensor imaging." Neuroimage 2007 Nov; 38(2):239-47.

Zhao JM, Clingman CS, Narvainen MJ, Kauppinen RA, van Zijl PC. "Oxygenation and hematocrit dependence of transverse relaxation rates of blood at 3T." Mag. Reson. Med. 2007 Sep; 58(3): 592-7.

Zhang J, van Zijl PC, Laterra J, Salhotra A, Lal B, Mori S. " Unique patterns of diffusion directionality in the rat brain tumors revea;ed by high-resolution diffusion tensor MRI." Mag. Reson Med. 2007 Sep; 58(3): 454-62.

2006

Jiang H, van Zijl PC, Kim J, Pearlson GD, Mori S.   "DtiStudio: Resource program for diffusion tensor computation and fiber bundle tracking."  Comput Methods Programs Biomed. 2006 Feb;81(2):106-116.

Zhang J, van Zijl PC, Mori S.    "Image contrast using the secondary and tertiary eigenvectors in diffusion tensor imaging."  Magn Reson Med. 2006 Feb;55(2):439-49.

Zackowski KM, Dubey P, Raymond GV, Mori S, Bastian AJ, Moser HW.   "Sensorimotor function and axonal integrity in adrenomyeloneuropathy."  Arch Neurol. 2006 Jan;63(1):74-80.

Hermoye L, Saint-Martin C, Cosnard G, Lee SK, Kim J, Nassogne MC, Menten R, Clapuyt P, Donohue PK, Hua K, Wakana S, Jiang H, van Zijl PC, Mori S.   "Pediatric diffusion tensor imaging: normal database and observation of the white matter maturation in early childhood."  Neuroimage. 2006 Jan 15;29(2):493-504.

Ren, T., Anderson, A., Shen, W-B., Huang, H., Plachez, C., Zhang, J., Mori, S., Kinsman, SL., Richard, LJ.  “Imaging, anatomical and molecular analysis of callosal formation in the developing human fetal brain”. Anat Rec A Discov Mol Cell Evol Biol. 2006 Feb;288(2):191-204.

Zackowski, KM, Dubey, P, Raymond, MD, Mori, S, Bastain, AJ, Moser, HW. “Sensorimotor function and axonal integrity in adrenobyeloneuropathy”.  Arch Neurol. 2006 Jan;63(1):74-80.

2005

Yamada, I, Kizu, O, Ito, H, Kubota, T., Akada, W., Goto, M, Takeda, A, Konishi, J. Sasajima, H., Mineura K, Mori, S, Nishimura T.  “Tractography for arteriovenous malformations near the sensorimotor cortices”. AJNR, 26, 598-602 (2005)

Reading, S, Mori, S., “Regional white matter change in pre-symptomatic Huntington’s disease: a diffusion tensor study”. Psychiatry Res. 2005 Oct 30;140(1):55-62.

Dubey, P., Fatemi, A, Huang H, Nagae-Poetscher, L, Wakana, S, Barker, P, van Zijl, PCM, Moser, HW, Mori, S, Raymond, GV. “Diffusion tensor 3D-fiber tracing reveals occult tract specific structural abnormalities in “Pure” adrenomyeloneuropathy”.  Annal. Neurol. 2005 Nov;58(5):758-66.

Huang H, Zhang J, Jiang H, Wakana S, Poetscher L, Miller MI, van Zijl PC, Hillis AE, Wytik R, Mori S.  “DTI tractography based parcellation of the white matter: application to mid sagittal morphology of the corpus callosum.”  Neuroimage 2005; 26(1) : 195-205.

Wakana S, Nagae-Poetscher LM, Jiang H, van Zijl P, Golay X, Mori S.   "Macroscopic orientation component analysis of brain white matter and thalamus based on diffusion tensor imaging."  Magn Reson Med. 2005 Mar;53(3):649-57.

2004

Yamada, K, Ito, H., Nakamura, H., Kizu, O., Akada, W., Kubota, T., Goto, M., Konishi, J., Yoshikawa, K., Shiga, K., Nakagawa, M., Mori, S., Nishimura, T., “Stroke patients’ evolving symptoms assessed by tractography”, J. Magn. Reson. Imaging, 20, 923-929 (2004)
 

Takahashi, T, Kinsman, S., Makris, N., Grant, E., Haselgrove, C., McInerney, S., Kennedy, DN., Takahashi, T., Fredrickson, K., Mori, S., Caviness, VS., “Holoprosencephaly-Topologic variations in a Liveborn series: A general model based upon MRI analysis”, J. Neurocytol, 33, 23-35 (2004)
 

Lee, SK, Kim, DI., Mori, S., Kim, J., Kim, HD., Heo, K., Lee, BI., “Diffusion tensor MRI visualize decreased subcortical fiber connectivity in focal cortical dysplasia”, NeuroImage, 22, 1826-1829 (2004)
 

Lee, SK, Mori, S., Kim, D.J., Kim, S.Y., Kim, S.Y., Kim, D.I., “Diffusion tensor MR imaging visualizes the altered hemispheric fiber connection in callosal dysgenesis”, Am. J. Neuroradiol., 25, 25-28 (2004)
 

Amiry-Moghaddam, M., Xue, R, Haug, F.M., Neely, J.D., Bhardwaj, A., Agre, P., Adams, M., Froehner, S.D., Mori, S., Ottersen, O.P., “Alpha Syntrophin deletion removes the perivascular but not the endothelial pool of aquaporin-4 at the blood-brain-barrier and delays the development of brain edema in an experimental model of acute hyponatremia”, FASEB, 18, 542-544 (2004)
 

Wakana, S., Jiang, H., Nagae-Poetscher, M., van Zijl, P.C.M., Mori, S., “A fiber-tract based atlas of Human white matter anatomy”, Radiology, 230, 77-87 (2004) (pdf downloading)

Nagae-Poetscer LM, Jiang H, Wakana S, Golay X, van Zijl PC, Mori S.  “High-resolution Diffusion Tensor Imaging of the brain stem at 3T.”  AJNR Am J Neuroradiol 2004; 25(8): 1325-30.

Huang H, Zhang J, van Zijl PC, Mori S.  “Analysis of noise effects on the DTI-based tractography using the brute-force and multi-ROI approach.”  Mag. Reson. Med 2004; 52(3): 559-65.

Jaermann T, Crelier G, Pruessmann KP, Golay X, Netsch T, van Muiswinkel AM, Mori S, van Zijl PC, Valavanis A, Kollias S, Boesiger P.  “SENSE-DTI at 3T.”  Mag. Reson. Med 2004; 51(2): 230-6.

2003

Lee, SK., Mori, S., Kim DJ., Kim SY., Chu, M., Heo, K., Lee BI., Kim, DI., “Diffusion tensor MRI and fiber tractography of cerebellar atrophy in phenytoin users”, Epilepsia, 2003, 44, 1536-1540 (2003)
 

Song, A.W., Harshbarger, T., Li, T., Kim, K.H., Ugurbil, K., Mori, S., Kim D, “Functional activation using diffusion coefficient dependent contrast allows better spatial localization to the neuronal activity: Evidence using diffusion tensor imaging and fiber tracking”, NeuroImage, 20, 955-961 (2003)
 

Yamada, K., Mori, S., Nakamura, H, Ito, H., Kizu, O, Shiga, K, Yoshikawa, K, Makino, M, Yuen S, Kubota T, Tanaka O, Nishimura T., “Fiber-tracking method reveals sensorimoter pathway involvement in stroke patients”, Stroke, 34, 159-162, (2003)
 

Takahashi, T., Kinsman, S., Makris, N., Grant, E., Haselgrove, C., Kennedy, D.N., Takahashi, T., Fredrickson, K., Mori, S., Caviness, V.S., “Semilobar holoprosencephaly with midline seam: A topologic and morphogenetic model based upon MRI analysis”, Cerebral Cortex, 12, 1299-1312 (2003)
 

Yamada, K., Kizu, O., Mori, S., Ito, H., Nakamura, H., Yuen, S., Kubota, T., Tanaka, O., Akada, W., Sasajima, H., Mineura, K., Nishimura, T., “Brain fiber tracking with clinically feasible diffusion tensor MR imaging: Initial experience”, Radiology, 227, 295-301 (2003)

2002
 

Selnes, O.A., van Zijl, P.C.M., Barker, P.B., Hillis, A.E., Mori, S., “MR diffusion tensor imaging documented arcuate fasciculus lesion in a patient with normal repetition performance”, Aphasiology, 16, 897-901 (2002)
 

Eichler, FS., Itoh, R, Barker, P.B., Mori, S., Garrett, E.S., van Zijl, P.C.M., Moser, H.W., Raymond, G.V., Melhem, E.R., “Proton MR spectroscopic and diffusion tensor brain MR imaging in X-linked adrenoleukodystrophy: Initial experience”, Radiology, 225, 245-252 (2002)
 

Hoon, A.H., Lawrie, W.T., Melhem, E.R. Reinhardt, E.M., Solaiyappan, M., Jiang, H., Johnston, M.V., and Mori, S., "Diffusion tensor imaging of PVL shows affected sensory cortex white matter pathways", Neurology, in press
 

Albayram, S., Melhem, E.R., Mori, S., Zinreich, J., Barkovich, A.J., Kinsman, S.L., "Diffusion Tensor MR Imaging of White Matter Tracts of the Brainstem in Children with Holoprosencephaly: Initial Experience", Radiology, 223, 645-651 (2002)
 

Mori S, Fredericksen K, van Zijl PC, Stieltjes, B., Kraut, A.K., Solaiyappan, M., Pomper, M.D., "Brain white matter anatomy of tumor patients using diffusion tensor imaging." Annals of Neurol. 51, 377-380 (2002).
 

Mori, S., W. E. Kaufmann, C. Davatzikos, B. Stieltjes, L. Amodei, K. Fredericksen, G. D. Pearlson, M. Solaiyappan, G. V. Raymond, H. W. Moser and P. C. van Zijl, "Imaging cortical association tracts in the human brain using diffusion-tensor-based axonal tracking", Magn. Reson. Med. 47, 215-223 (2002).

Golay X, Jiang H, van Zijl PCM, Mori S.  "High-Resolution Isotropic 3D Diffusion Tensor Imaging of the Human Brain."  Magn. Reson. Med. 2002; 47(5) : 837-843.

Jiang H, Golay X, van Zijl PCM, Mori S. "Origin and Minimization of Residual Motion-Related Artifacts in Navigator-Corrected Segmented Diffusion-Weighted EPI of the Human Brain." Magn. Reson. Med. 2002; 47(4) : 818-22.

Mori S, Kaufmann WE, Davatzikos C, Stieltjes B, Amodei L, Fredericksen K, Pearlson GD, Melhem ER, Solaiyappan M, Raymond GV, Moser HW, van Zijl PC.  "Imaging cortical association tracts in the human brain using diffusion-tensor-based axanal tracking."  Magn Reson Med 2002; 47(2): 215-23.

Mori S, Frederiksen K, vanZijl PC, Stieltjes B, Kraut MA, Solaiyappan M, Pomper MG.  "Brain white matter anatomy of tumor patients evaluated with diffusion tensor imaging."  Ann Neurol 2002; 51(3): 377-80.

Melhem ER, Mori S, Mukundan G, Kraut M, Pomper MG, van Zijl PC.  "Diffusion tensor MR imaging of the brain and white matter tractography."  AJR Am J Roentgenol 2002; 178(1):3-16.

Zhang J, vanZijl PC, Mori S.  "Three-dimensional diffusion tensor magnetic resonance microimaging of adult mouse brain and hippocampus."  Neuroimage 2002; 15(4): 892-901.

2001

Ito R, Melhem ER, Mori S, Eichler ES, Raymond GV, Moser HW. "Diffusion tensor brain MR imaging in X-Linked Adrenoleukodystrophy." Neurology 2001; 56(4):544-547.

Mori S, Itoh R, Zhang J, Kaufmann WE, van Zijl PC, Solaiyappan M, Yarowsky P. "Diffusion tensor imaging of the developing mouse brain." Magn Reson Med. 2001 ; 46(1):18-23.

Stieltjes B, Kaufmann WE, van Zijl PC, Pearlson GD, and Mori S. Diffusion Tensor Imaging and Axonal Tracking in the Human Brainstem". Neuroimage 2001; 14(3):723-735.

Wityk RJ, Goldsborough MA, Hillis A, Beauchamp N, Barker PB, Borowicz MS, McKhann G. "Diffusion- and Perfusion- weighted Brain MRI in patients with neurological complications after cardiac surgery." Archives Neuology 2001; 58(4):571-6.

Xue R, Sawada M, Goto S, Hurn PD, Traystman RJ, van Zijl PC, Mori S. "Rapid three-dimensional diffusion MRI facilitates the study of acute stroke in mice." Magn Reson Med. 2001 ;46(1):183-8.

2000

Albensi BC, Knoblach SM, Chew BGM, O'Reilly MP, Faden AI, & Pekar JJ. "Diffusion and High Resolution MRI of Traumatic Brain Injuries in Rats: Time Course and Correlation with Histology." Exp. Neurology 2000; 162(1):61-72. 

Carhuapoma JR, Wang PY, Beauchamp NJ, Keyl PM, Hanley DF, Barker PB."Diffusion-weighted MRI and proton MR spectroscopic imaging in the study of secondary neuronal injury after intracerebral hemorrhage." Stroke 2000; 31(3):726-32.

Itoh R, Melhem ER and Folkers PJ. "Diffusion-tensor MR imaging of the human brain with gradient- and spin-echo readout: technical note." AJNR Am J Neuroradiol 2000; 21(9):1591-1595.

Melhem ER, Itoh R, Jones L, Barker PB. "Diffusion Tensor MR Imaging of the Brain: Effect of Diffusion weighting on trace and anisotropy measurements." AJNR 2000; 21(10):1813-20.

Mori S, Kaufmann WE, Pearlson GD, Crain BJ, Stieltjes B, Solaiyappan M, van Zijl PC. "In vivo visualization of human neural pathways by magnetic resonance imaging." Ann Neurol. 2000 ; 47(3):412-4.

1999

Barker PB, Ulug AM, Mori S, Raymond GV, Moser H, Solaiyappan M, van Zijl PCM. "New MRI Techniques: Diffusion Tensor Imaging in Adrenoleukodystrophy."Journal of Molecular Neuroscience 1999; 13:254-258.

Beauchamp NJ, Barker PB, Wang PY, van Zijl PCM. "Imaging of Acute Cerebral Ischemia: State of the Art." Radiology 1999; 212(2):307-324.

Mori S, Barker PB. "Diffusion magnetic resonance imaging: its principle and applications." Anat Rec 1999; 257(3):102-9.

Mori S, Crain BJ, Chacko VP, van Zijl PC. "Three-dimensional tracking of axonal projections in the brain by magnetic resonance imaging." Ann Neurol. 1999 ; 45(2): 265-9.

Ulug AM, van Zijl PC. "Orientation-independent diffusion imaging without tensor diagonalization: anisotropy definitions based on physical attributes of the diffusion ellipsoid."  J Magn Reson Imaging. 1999 ; 9(6): 804-13.

van Zijl PC, Mori S, Beauchamp N, Wang PY, Barker PB, "Diffusion and Perfusion Imaging of the Brain; Overview and Recent Work", in "Exerpta Medica Intern. Congress Series", eds. S. Naruse, H. Watari, (ICS 1192-R) 1999, p. 179-184.

Wang PK, Barker PB, Wityk RJ, Ulug AM, van Zijl PC, & Beauchamp NJ. "Diffusion Negative Acute Stroke: A Report of Two Cases." AJNR  1999 ;20(10):1876- 1880 .

Xue R, van Zijl PC, Mori S, "Brain Axonal Projection Reconstruction by Rapid 3D Diffusion MRI", in "Exerpta Medica Intern. Congress Series", eds. S. Naruse, H. Watari, (ICS 1192-R) 1999, p. 199-200.

Xue R, van Zijl PC, Crain BJ, Solaiyappan M, Mori S. "In vivo three-dimensional reconstruction of rat brain axonal projections by diffusion tensor imaging." Magn Reson Med. 1999 Dec; 42(6): 1123-7.